Browse of TCMCG029C09161 protein

CDS

Accession Number	TCMCG029C09161
gbkey	CDS
Protein Id	XP_023754875.1
Location	join(1753294..1753317,1753536..1753606,1753696..1753835,1753928..1754014,1754155..1754242,1754371..1754451,1754531..1754608,1754724..1754803,1755104..1755182,1755279..1755566,1755668..1755727,1755835..1756069,1756159..1756377,1756477..1757844,1758152..1758392,1758488..1758602,1758705..1758792,1758882..1758960,1759049..1760323,1760411..1760761,1760852..1761471)
Gene	LOC111903331
GeneID	111903331
Organism	Lactuca sativa

Protein

Length	1888aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA432228
db_source	XM_023899107.1
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X1 [Lactuca sativa]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACAAATGTCTTCAAAATCGGTGGTCTACATCAAGTATCATGGTTCCAATATCTCCCGAACGAATCTGATCCCAACATTTCTGATAGAAGTGCAAAGTTAAACCAAAGAGATTTTGCTGCACAATTAGTCCTTTCATCCCATTTGCAGTTACAAAAAGATGGATTCCTTAGCACATGGGGTAATTCTTTTGTTGGCCCTTGGGATCCATCTCAGGGTCTACATAACCCTGATGAGAAAATCAAGCTATGGCTTTTTATCCCTGGTCGCCATTCGTCTCCCAATGATAAAGCCAAAGCCATTGTATCTAAACTAAGAGTTCTAGCATCTGGAGTTTGGTTAGCACCTGGGGATTCTGAAGAGGTGGCAGCTGCACTTTCTCAAGCTTTAAGGAATTGTATTGAAAGAGCATTAGTAAATCTTTCATATATGAGATTTGGGGATGTATTTTCAAGATACCATCCATCTTCACAAGGAGAATCATTTAGGAGAGGCAGACCAATGCTTGAGTTCATATTTACTGCAACAGAAGAAGCAGTATTCGTTCATGTCATAATATCTGCAAAGCATGTTCGGGCACTTTCAAATGGTGACATGGAGGCAATCTTGAAGCGCACGTCTAGTCATTCTAGTGACAGGCTTCCAGTTATTGCCTCACCTCATGGAATGCGTGGCAGACTTACAGGATTTTGTCCAGGTGATCTTGTGAAGCAATTGTATTTCAGTTCTGGAAAGTTCAAGGCTTCAAATGGAATTGTAGGTCTTCCAAACCAAATGTCCCAAACCTCTGGGTGCCAACTCAGGGGCCAAAAATGTTACCTTGAAGTAACCCTAGGGTGCGAAAGTGTCAAAAATGAGAAACCATTACCATCAAATTCAACTAAAAACTTTTCAAAGCATCATTCAACTGAAAATGAGAAGGGGCCCACGTACGACAAAACTTTCATATATCCAACCGAAGCAGTTCTTGTACCCGTTGTTCAAACATCATCCGCTAGATCCTCTCTAAAAAGATTCTGGCTTCAAAACTGGATGGGCCCATCATTGTCTGGTTCCTCTTTCTCTATGCAATGTGATGCTTTGAGTAGCATGGATGGATCATGGCATGATGCAAGCATCCGATGTCAACAGGGTTACAATAGTAGTGGGAATAGTAATAGTAGCAGTATTAGCACAAGTTCATCTAGTGATAGTGATTATAGAATGACAGCAGAAACTGGTGACCTTGAAGCTGATGCTGATTCTCTTTCTTGCATAAAATCTGGATTAACTTCTGCTGATCAAATGCATATTGATGCCTCCAAAATGGGTAGCAAGCGATCAAGGCCTGGAATGACTGAGTCATATGGTCAAGCTGGAGCAGTCATTAATGACTTTGGGTCAATGGAAGTCAACAATGAGCAAGGTGGGTCCCAGTGGGATTGGGATGATGATGACAGAGGCATGGGTATGGACATTCAAGCACTTCTCTCAGAGTTTGGAGATTTTGGAGACTTTTTTGAAAATGATGCTTTACCTTTTGGAGAACCACCAGGGACTGAAGAGTCACAAACACAAACTCCCATGTTTTCTGCAACGGATGGTGGAGATGCAAGTAGCAGCCCATTTACAGGGATGATGGATGCATCTGATCAGATCATTATTCCACTTGGGTTTTCATCTTTTGAAAGTTTTAATCCTCCATCAACTGTTGTAGAAGAATCCATAAGCAAAAATCAAGAACTCACAAAAGAAACAGTGTCATCAGGCTCAATGAACTACAACCCACCAGCTAACAACACTGAGTTTGATTATGTAATAAAAGCAGAAGCCATGATGACATTCGCACCTGAATATTCAGCAGTTGAAACCCCTGGAAATGACTTGTTATTAACTGTCATTAAAACCCCATATGTCCCAAAATCAAGAACAACCGAAAGTGCAAATTCAAGCACGAATAATTACATCTACTCTTCAATTCCTCCTAAGCATGATTTATCTGATGATAAATCGGGTGCGAATTTGAATGATAAGAACTACTACACTCATGTGGAAAGTGGAAAACTTAAAGATAAAAAAGATGTTAAGGATGAAAAGCTTTCGTTTCGCGACAGTTTTGGTTTTGGAGAAGATGTTGCTAATGCTAATGCTTCAGGTTTCAGTTCTTTAAGTACTGCTTCAAGATCAAAGATTTTGGAAGGAGGATTAGGAATGGAGAATTTTGTTTTGTCATCAAAGACAGGTGTCGCGAATGAACTCGAATGCGTCATGTTTCAAGCTTTTATGTGTAGAATAAGACATACATTATTAGCTTCAAACAGATTATCCGGGAACAACAACAACAACAACAACAACAACAACAACAATAATAATAATAATAATAATACAATTTTGTATCAAATGCATAGTGAATCAAATGTTTTGGGGGATAACATGTCATCAAAATATGATATAAAAAAGAAAGAAACAATTCCAGTTAGAATCGCAGGTGGTGACATGGACACTGGGCTTCTAGATGGGCCTTTGAACTCGCCTGTTGGTGTTTGGAGGACAGTTGGTGTCGCAAAAGGGTCAAAGGCAATGAGCATGACACAGAATATGGAATCTTTCGGGAATATTCCTCATAATTCTTTCACTGAGGAAGGAATGTTGTTGTCATATGGTCAAAGGCAACCTCTTTTAGAGCTTCTTGATGGAATGTCTTTGCTTTTTCAACAAGCGTTGACTTTTGTTGATGTCACTTTGGATTCCGATTGTGGGGACGGGCCCTACGGGTGGTTGGCAATGCAAGAGCAATGGAGACGCGGGTTTTCGTGTGGGCCCGCTTTGGTTCATGCGGGTTGTGGCGGGGTGTTGGCAGCTTCTCATTCTCTTGATATTGCTGGTGTCGAGTTAGCGGATCCACTTTCCGCTGATGTTCCGGCATCGTATGCTATAACATTACTACAATCGGACATAAAGTTAGCCTTGAAATCGGCTTTTGGTAACTTTGATGGACCCTTGTCAGTCATGGATTGGTGCAAAGGGCGAAATGGTCAAATTGATGGGTTTTCAGCTGAGTCATCAGCTAGTATAAACGATTGTAGAGATTCTTCAAGTACACCAACAAGCCCATCTCAATCTGCTGGTGGATCAACATCCTGTCTTAGCAAAGGTAATGGAAATCGAATTGATGATGTAAGCGAAAGAAGATCAAACCAAGATGAGTCAGAGCAGCAACTCGGCCTCAGGCCTGCACTTCTTGTGCTTCCTATTCCTGCTATTCTTGTTGGGTATCAAGATGATTGGCTAAAGACATCAGCAAGCTCTCTTCAACATTGGGAAAAAGCTCCTTTTGAACCTTATGCTATGCAGAAACACATGAATTATTGCGTTGTATGTCCAGATATCGATCCCCTTACAACTGCTGCTGCAGACTTCTTTCAACAGCTCGACACTGTTTATGAAACCTGCAAATTGGGAACTCATTCACCTCAAAATTTGGGTAACCAAACTTCCAAAGACTCGGTCAAATGGTCAACTTCTGGGTTTGTTTTACTAGATTGCCCTCAATCAATGAAGATCGAAGGCGATAGTGCATCTCTCGTGGGATCAATCAGTGATTACTTTCTTTCTTTATCCAACGGTTGGGATTTAACAAGTTTCTTGAAATCCCTCTCCAAAGTTCTCAAAACCCTAAAACTCAATTCCATCTTTGCCCCTAATTCAAAAGAAGGAAACACCACTCCATGCACAGTAATATACGTGGTGTGCCCGTTTCCCGAACCCGTTTCGATTTTAAAAACCGTGGTTGAATCATGTGTAGCCATTGGATCTGCCATGTGTCCACCATCCGATAAAGAACGAAGATCCGCCTTACAAAATCAAGTTGGAAAGGCTTTAAGTTGCACAACAGCTGTAGATGAAGCATCAATTTCAAACATTGTGACAATTTCCGGTTTCAGTGTCCCTAAATTAGTCCTCCAAATCATAACCGTTGATTCCATCTTTCGTGTCACAACCCCGTCTCTCAACGAGCCCGTGATTTTAAAAGAAATCGCCTTCACCGTCTACAATAAAGCCCGAAGAATCTCCCGAGGAAATGGAATCGCGGATTCCATTCCATCGGTTAGATCTCAGTCGCAGTCTCATTCTGGAATGATGCAAATGAATTCGAATTCGCCGATTCCTGGGATGTGGAAAGACTCAATTGCCCCTCGAATGGTGGGACCTAGAGAGGGCGAGTGGGATAACAACTCATGGCAAATGTCTAATCGTGTCACGGGAGAATATTTTCTTCAAGATGAGTTAAAATACATGTTTGAGCCGCTTTTTATTCTTGCGGATTCACCGGAACGCGGGATTCCGCCGGAATCATTGAAGGTTTTGTCAGATGATGGGACGAGTTCGGATACCGGAGACGGGTTGGATGACGGATACGGGTCGACCCATAAACCTCCCCCGAGTTTACATTGTTGTTATGGATGGACAGAGGATTGGAAGTGGCTTGTTTGTATATGGACTGATTCCAGAGGGGAATTACTCGATAGCTATACGTTTCCATTCGGTGGAATCAGTAGTAGACAAGACACAAAGGGGCTTCAATTCCTTTTTGTTCAAATTTTGCAACAAGGTTGTCAGATACTTCAGGCATGTTCACCGGAAACAACCACCGCCAGGCCACGAGATTTTGTCATTACGCGTATCGGTTGCTTTTTTGAACTCGAATGCCAAGAATGGCAGAAAGCACTTTATTCTATTGGTGGCTCGGAGGTGAAAAAGTGGTCATTGCAACTCCGGCGATCGGTGCCGGATGGGATTCCGGCGAGTAGTAATGGCGGTTCTGAAATGGGTATGATTCAAGATCGGAATCTGGCGGCTCATGGGAAGGGTGGTGGGTTTATGAAAGGTGGTGGGATGGGGCAGGCGGCTTCTAGAAAGCAGATTTTGAGTGGTGGTGGTGGTGGTGGACATATGGGAATGGATAATTCCAAGGGTTTGCTTCAATGGGTGCAAAGTATAACTTTTGTATCGGTTTCAGTTGATCATTCTTTACAGTTGGTTTATCAAGCGGATTCATCTCCAGGGACAACTCAAGGGAGTGGAATCATGGGGCAATCGGTGTACACTGAAGGATTCACACCTGTAAAATCTCTGGGTTCCACATCAGCATCTTACATATTCATTCCATCACCCACCATGCGATTCCTCCCCCCGAACCCCCTCCAACTCCCCACCTGCCTAACCTCGGAATCACCGCCACTCGCCCACCTCCTCCACAGCAAGGGTTCCGCCATTCCCATTTCCACCGGATTTGTAGTCTCAAAAGCCGTTCCTTCCATGCGAAAAGATTCAAGAACCAACTCCAAAGAAGAATGGCCTTCGGTTCTCTCAGTAGCCCTTTTCGATTACTACGGAGGCAACAACAATAACAATAGCAACAACAATAATAATAATAATAATAACAACAACAATAATAATAACGAAAAAACATCCAAGAACATGGGAAAATCTATGGAGAATCATGTGATTTTGGACAGAGTGGCGGCTGAGCTACACGCGTTGTCTTGGATGACTGTGAGCCCGGGGTACTTAGAAAGAAGAACATCGCTTCCGTTTCATTGTGATATGGTGTTGAGGTTAAGAAGGCTTTTGCATTTTGCGGATAAACAACTCTCGCAGATTTCGGTTAAGTCAGAAGTTTAG

Protein:   MWTNVFKIGGLHQVSWFQYLPNESDPNISDRSAKLNQRDFAAQLVLSSHLQLQKDGFLSTWGNSFVGPWDPSQGLHNPDEKIKLWLFIPGRHSSPNDKAKAIVSKLRVLASGVWLAPGDSEEVAAALSQALRNCIERALVNLSYMRFGDVFSRYHPSSQGESFRRGRPMLEFIFTATEEAVFVHVIISAKHVRALSNGDMEAILKRTSSHSSDRLPVIASPHGMRGRLTGFCPGDLVKQLYFSSGKFKASNGIVGLPNQMSQTSGCQLRGQKCYLEVTLGCESVKNEKPLPSNSTKNFSKHHSTENEKGPTYDKTFIYPTEAVLVPVVQTSSARSSLKRFWLQNWMGPSLSGSSFSMQCDALSSMDGSWHDASIRCQQGYNSSGNSNSSSISTSSSSDSDYRMTAETGDLEADADSLSCIKSGLTSADQMHIDASKMGSKRSRPGMTESYGQAGAVINDFGSMEVNNEQGGSQWDWDDDDRGMGMDIQALLSEFGDFGDFFENDALPFGEPPGTEESQTQTPMFSATDGGDASSSPFTGMMDASDQIIIPLGFSSFESFNPPSTVVEESISKNQELTKETVSSGSMNYNPPANNTEFDYVIKAEAMMTFAPEYSAVETPGNDLLLTVIKTPYVPKSRTTESANSSTNNYIYSSIPPKHDLSDDKSGANLNDKNYYTHVESGKLKDKKDVKDEKLSFRDSFGFGEDVANANASGFSSLSTASRSKILEGGLGMENFVLSSKTGVANELECVMFQAFMCRIRHTLLASNRLSGNNNNNNNNNNNNNNNNNNTILYQMHSESNVLGDNMSSKYDIKKKETIPVRIAGGDMDTGLLDGPLNSPVGVWRTVGVAKGSKAMSMTQNMESFGNIPHNSFTEEGMLLSYGQRQPLLELLDGMSLLFQQALTFVDVTLDSDCGDGPYGWLAMQEQWRRGFSCGPALVHAGCGGVLAASHSLDIAGVELADPLSADVPASYAITLLQSDIKLALKSAFGNFDGPLSVMDWCKGRNGQIDGFSAESSASINDCRDSSSTPTSPSQSAGGSTSCLSKGNGNRIDDVSERRSNQDESEQQLGLRPALLVLPIPAILVGYQDDWLKTSASSLQHWEKAPFEPYAMQKHMNYCVVCPDIDPLTTAAADFFQQLDTVYETCKLGTHSPQNLGNQTSKDSVKWSTSGFVLLDCPQSMKIEGDSASLVGSISDYFLSLSNGWDLTSFLKSLSKVLKTLKLNSIFAPNSKEGNTTPCTVIYVVCPFPEPVSILKTVVESCVAIGSAMCPPSDKERRSALQNQVGKALSCTTAVDEASISNIVTISGFSVPKLVLQIITVDSIFRVTTPSLNEPVILKEIAFTVYNKARRISRGNGIADSIPSVRSQSQSHSGMMQMNSNSPIPGMWKDSIAPRMVGPREGEWDNNSWQMSNRVTGEYFLQDELKYMFEPLFILADSPERGIPPESLKVLSDDGTSSDTGDGLDDGYGSTHKPPPSLHCCYGWTEDWKWLVCIWTDSRGELLDSYTFPFGGISSRQDTKGLQFLFVQILQQGCQILQACSPETTTARPRDFVITRIGCFFELECQEWQKALYSIGGSEVKKWSLQLRRSVPDGIPASSNGGSEMGMIQDRNLAAHGKGGGFMKGGGMGQAASRKQILSGGGGGGHMGMDNSKGLLQWVQSITFVSVSVDHSLQLVYQADSSPGTTQGSGIMGQSVYTEGFTPVKSLGSTSASYIFIPSPTMRFLPPNPLQLPTCLTSESPPLAHLLHSKGSAIPISTGFVVSKAVPSMRKDSRTNSKEEWPSVLSVALFDYYGGNNNNNSNNNNNNNNNNNNNNNEKTSKNMGKSMENHVILDRVAAELHALSWMTVSPGYLERRTSLPFHCDMVLRLRRLLHFADKQLSQISVKSEV